Liftoff.bio

Directory

The bioinformatics & lab software catalog

16 curated tools for computational biology, genomics, imaging, and the modern wet lab. Know one we're missing? Submit it.

Showing 1 - 12 of 16 tools
Liftoff.bio illustration — cat molecular biology
Free

Molecular Biology & Editing

CHOPCHOP

Design and evaluate CRISPR guide RNAs

Web appCommand line
Liftoff.bio illustration — cat cheminformatics
Open source

Cheminformatics & Drug Discovery

DeepChem

Democratizing deep learning for the sciences

Python library
Liftoff.bio illustration — cat imaging
Open source

Bioimage Analysis

StarDist

Star-convex object detection for nuclei segmentation

Python libraryDesktop app
Liftoff.bio illustration — cat imaging
Open source

Bioimage Analysis

Cellpose

Generalist deep-learning cell and nucleus segmentation

Python libraryCommand lineDesktop app
Liftoff.bio illustration — post single cell
Free for academia

Single-Cell & Spatial

Arc State

A virtual cell model predicting perturbation responses

Python libraryModel weights
Liftoff.bio illustration — cat single cell
Open source

Single-Cell & Spatial

scvi-tools

Probabilistic, deep-learning models for single-cell omics

Python library
Liftoff.bio illustration — cat ai models
Open source

AI Models

BoltzGen

Toward universal binder design across modalities

Python libraryCommand lineModel weights
Liftoff.bio illustration — post structure models
Open source

AI Models

BindCraft

One-shot de novo binder design with AlphaFold2 backpropagation

Python libraryCommand line
Liftoff.bio illustration — cat ai models
Open source

AI Models

ProteinMPNN

Fast, robust inverse folding — sequences for a target backbone

Python libraryCommand lineModel weights
Liftoff.bio illustration — cat structural
Open source

AI Models

RFdiffusion

Generative diffusion for de novo protein backbone design

Python libraryCommand lineModel weights
Liftoff.bio illustration — post foundation models
Open source

AI Models

Evo 2

A genome-scale DNA foundation model across all domains of life

Python libraryModel weightsREST API
Liftoff.bio illustration — post foundation models
Open source

AI Models

ESM3 & ESM C

Frontier protein language models for representation and design

Python libraryREST APIModel weights