Liftoff.bio

Directory

The bioinformatics & lab software catalog

6 curated tools for computational biology, genomics, imaging, and the modern wet lab. Know one we're missing? Submit it.

Showing 1 - 6 of 6 tools
Liftoff.bio illustration — cat imaging
Open source

Bioimage Analysis

StarDist

Star-convex object detection for nuclei segmentation

Python libraryDesktop app
Liftoff.bio illustration — cat imaging
Open source

Bioimage Analysis

QuPath

Open software for whole-slide and digital pathology

Desktop app
Liftoff.bio illustration — cat imaging
Open source

Bioimage Analysis

Fiji / ImageJ

"Fiji Is Just ImageJ" — the classic bioimage analysis platform

Desktop app
Liftoff.bio illustration — cat imaging
Open source

Bioimage Analysis

napari

Fast, interactive n-dimensional image viewer for Python

Python libraryDesktop app
Liftoff.bio illustration — cat imaging
Open source

Bioimage Analysis

Cellpose

Generalist deep-learning cell and nucleus segmentation

Python libraryCommand lineDesktop app
Liftoff.bio illustration — cat single cell
Open source

Single-Cell & Spatial

Squidpy

Spatial single-cell analysis in Python

Python library