Liftoff.bio
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Open sourceSingle-Cell & SpatialAI Models

scvi-tools

Probabilistic, deep-learning models for single-cell omics

WebsiteSource codePackagePublication

scvi-tools packages a suite of probabilistic deep-generative models for single-cell data, built on PyTorch and integrated with the scverse/AnnData ecosystem.

Models

  • scVI — dimensionality reduction, batch correction and normalisation.
  • scANVI — semi-supervised label transfer.
  • totalVI / MultiVI — CITE-seq and multiomic integration.

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