Liftoff.bio

Directory

The bioinformatics & lab software catalog

15 curated tools for computational biology, genomics, imaging, and the modern wet lab. Know one we're missing? Submit it.

Showing 1 - 12 of 15 tools
Liftoff.bio illustration — cat databases
Free

Public Databases

RCSB Protein Data Bank

The global archive of 3D biomolecular structures

Web appREST APIDataset
Liftoff.bio illustration — cat cheminformatics
Open source

Structural Biology

OpenMM

A high-performance toolkit for molecular simulation

Python libraryCommand line
Liftoff.bio illustration — cat structural
Open source

Structural Biology

GROMACS

High-performance molecular dynamics simulation

Command line
Liftoff.bio illustration — cat structural
Open source

Structural Biology

Foldseek

Search protein structures at sequence-search speed

Command lineWeb app
Liftoff.bio illustration — cat structural
Free for academia

Structural Biology

UCSF ChimeraX

Next-generation molecular visualization and analysis

Desktop appPython library
Liftoff.bio illustration — cat structural
Freemium

Structural Biology

PyMOL

The classic molecular visualization system

Desktop appPython library
Liftoff.bio illustration — cat libraries
Open source

Libraries & SDKs

Biotite

A fast, NumPy-native toolkit for sequence and structure

Python library
Liftoff.bio illustration — cat ai models
Open source

AI Models

BoltzGen

Toward universal binder design across modalities

Python libraryCommand lineModel weights
Liftoff.bio illustration — post structure models
Open source

AI Models

BindCraft

One-shot de novo binder design with AlphaFold2 backpropagation

Python libraryCommand line
Liftoff.bio illustration — cat ai models
Open source

AI Models

ProteinMPNN

Fast, robust inverse folding — sequences for a target backbone

Python libraryCommand lineModel weights
Liftoff.bio illustration — cat structural
Open source

AI Models

RFdiffusion

Generative diffusion for de novo protein backbone design

Python libraryCommand lineModel weights