Liftoff.bio illustration — cat cheminformatics

OpenMM

A high-performance toolkit for molecular simulation

OpenMM is a library-first MD engine designed for extensibility and GPU performance. Its Python API makes it a favourite for custom force fields and machine-learning potentials.

Example

1from openmm.app import *
2from openmm import *
3from openmm.unit import *
4pdb = PDBFile('input.pdb')
5ff = ForceField('amber14-all.xml', 'amber14/tip3p.xml')
6system = ff.createSystem(pdb.topology, nonbondedMethod=PME)

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