Liftoff.bio illustration — cat cheminformatics

AutoDock Vina

Fast, widely used molecular docking

AutoDock Vina is a go-to engine for protein–ligand docking and structure-based virtual screening. Vina 1.2 adds a Python binding and improved scoring.

Highlights

  • Fast, accurate pose prediction and binding-score estimation.
  • Python API (and Meeko) for preparing receptors/ligands and scripting screens.
  • Scales to large libraries on commodity hardware.

Related tools

Liftoff.bio illustration — cat cheminformatics
Open source

Cheminformatics & Drug Discovery

RDKit

The open-source cheminformatics toolkit

Python libraryCommand line
Liftoff.bio illustration — cat cheminformatics
Open source

Cheminformatics & Drug Discovery

Open Babel

The chemistry toolbox for converting molecular formats

Command linePython library
Liftoff.bio illustration — cat ai models
Open source

AI Models

Boltz-2

Open-source structure and binding-affinity prediction, MIT licensed

Python libraryCommand lineModel weights